Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015925832.1_cds_XP_016474030.1_66099
CDS Infomation

[gene=LOC107795839] [db_xref=GeneID:107795839] [protein=probable mitochondrial-processing peptidase subunit beta, mitochondrial] [protein_id=XP_016474030.1] [location=join(40647..41318,45357..45521,45874..46011,46100..46251,46519..46627,49368..49466,49616..49681,50685..50792,51111..51197)] [gbkey=CDS]
Sequence

ATGGCCACGCGCCACCTTCTCAACCTCACGCGCCGCTCTCGAATCAATCGTTTTTCTCTT
CTACCACCATGTCTAACAATGTCTTCCCGATCCACCACCTCCGTAACCACCTCACCCCCT
TCCTCCCCACCCTCCCCACCTCCCCCAGACTTCATGATCTACGATCGCTTAGCTGAACAA
GTCAAATCAAAGATCAAACGCCTCGAAGACCCTAACCCTAAGTTCCTCCAGTACAATTCC
CCGCACCCTACGGTAGCGGATCACACCTCAATTCTCTCATCACCGGAGACTAAAATCACT
ACTCTCCCTAACGGCCTACGTGTCGCTACTGAATCGAACCTGTCATCCTCAACGGCTACC
GTCGGAGTTTGGATCGACGCTGGATCTCGATTTGAGACGGAGGAGAATAACGGCGTCGCG
CATTTCCTTGAGCATATGATTTTTAAGGGAACGGAGAAACGGCCTATTAGGGCATTGGAA
GAGGAAATTGAGAATATGGGAGGGCATTTGAATGCGTATACTTCTAGGGAACAGACTGCG
TATTTCGCTAAGGTTTTGGGATCTGATGTGCCAAAGGCGATTGATATACTTGGGGATATT
TTGCAGAATTCGCTTTTGGAGGAAGATAAGATTGTTCGGGAGCGTAGTGTGATTCTTCGG
GAAATGGAAGAGGTGGAAAAACAACCGGAGGAAGTCATCTTTGACCAGTTACATACTACT
GCATTCCAGTACACTCCATTGGGTAGAACTATTCTTGGACCTGCCCAGAACATTGAGAAA
ATGACAAGAGATCATATTCAAGATTACATTTCAACCCACTATGGTGCTCATAGAATGGTA
ATTTCTGCTGCTGGAGCTGTGAAGCATGAAGATGTCGTTGAGCTAGTGAAGAAACATTTT
ACAAAACTATCATCTAATCCTATTACCACTTCCCAATTGGTAGCAGATGAGCCAGCAATA
TTTACAGGTTCAGAGATACGTATCATTGACGATGATCTGCCTCTTGCTCAATTCGCTGTT
GCATTTAGTGGAGCATCATGGACAGACCCTGATTCCATAGCTTTGATGGTCATGCAACAA
ATGCTGGGATCATGGAACAAACCTTCAGGAGGCGGGAAGCACATGGGTTCAGAGCTTGTC
CAAAGGGTGGCCATTAATGAAATAGCTGAGAGTGTGATGGCATTTAACACCAACTATAAA
GACACAGGGCTGTTTGGTGTCTATGCTGAAGCCAAGCCTGATTGCTTGAGTGACTTAGCT
TATGTCATCATGCAAGGGATATGCAAGTTATGTTATAGAGTGTCAGAAGCTGATGTCATT
CGTGCACGTAATCAGCTCAAATCTTCTTTGATGCTCCACATTGATGGATCGGGCCCTACT
GCTGAAGACATTGGACGGCAGTTAATCACGTATGGCCGCAGAATTCCACATGCTGAGTTA
TTTTCCAGAATTGACAGGGTCGATGCTGACACTATCAAGCGAGTTGCAAATCGCTTTATT
TTCGACAGGGACATTGCAATATCAGCAAGGGGACCGATTCAGGATTTGCCTGATTATAAC
TGGTTCAGACGCAGGACATACTGGTTGCGCTACTAG

Peptide Sequence

PEP ID

XP_016474030.1
PEP Infomation

PREDICTED: probable mitochondrial-processing peptidase subunit beta, mitochondrial [Nicotiana tabacum]
Sequence

MATRHLLNLTRRSRINRFSLLPPCLTMSSRSTTSVTTSPPSSPPSPPPPDFMIYDRLAEQ
VKSKIKRLEDPNPKFLQYNSPHPTVADHTSILSSPETKITTLPNGLRVATESNLSSSTAT
VGVWIDAGSRFETEENNGVAHFLEHMIFKGTEKRPIRALEEEIENMGGHLNAYTSREQTA
YFAKVLGSDVPKAIDILGDILQNSLLEEDKIVRERSVILREMEEVEKQPEEVIFDQLHTT
AFQYTPLGRTILGPAQNIEKMTRDHIQDYISTHYGAHRMVISAAGAVKHEDVVELVKKHF
TKLSSNPITTSQLVADEPAIFTGSEIRIIDDDLPLAQFAVAFSGASWTDPDSIALMVMQQ
MLGSWNKPSGGGKHMGSELVQRVAINEIAESVMAFNTNYKDTGLFGVYAEAKPDCLSDLA
YVIMQGICKLCYRVSEADVIRARNQLKSSLMLHIDGSGPTAEDIGRQLITYGRRIPHAEL
FSRIDRVDADTIKRVANRFIFDRDIAISARGPIQDLPDYNWFRRRTYWLRY

Transcript Sequence

Gene sequence data has not been registered.